E. coli data resources
Sequence data
The E.coli Genome center
http://www.genome.wisc.edu/
Fred Blattner's genome sequence page. Use the  NCBI  or  Colibri  sites for searches. Use the NCBI FTP site for down loads
NCBI
http://www.ncbi.nlm.nih.gov/cgi-bin/Entrez/framik?db=Genome&gi=115/
Searchable & BLASTable for all genome sequences. This link directs to E. coli
The Escherichia coli databank
http://gtcw3.aist-nara.ac.jp/mori/research/dbservice/ecoli-e.html
Japanese E. coli genome project
Other useful E. coli information
Colibri
http://www.pasteur.fr/Bio/Colibri.html
A searchable (& BLASTable) database of E. coli genome sequence data
EcoCyc: Encyclopedia of E. coli genes and metabolism
http://BioCyc.org/ecocyc/
Peter Karp's database of metabolic pathways in E. coli
EcoGene
http://bmb.med.miami.edu/EcoGene/EcoWeb/
EcoGene database
E. coli Genetic Stock Center
http://cgsc.biology.yale.edu/
Source for strains and information about mutations in strains
The E. coli index
http://web.bham.ac.uk/bcm4ght6/res.html
Reference to E. coli resources. Also contains an update of genes characterized since the completion of the genome in 1997
GenProtEC (Marine Biology Laboratory)
We've lost track of this site. Do you know where it is? Email us! opaliy@nature.berkeley.edu
E. coli genes are organized by functions. Also contains a database of paralogous genes within E. coli
George Church's E. coli site
http://twod.med.harvard.edu
Various E. coli projects and data
Indigo
http://indigo.genetique.uvsq.fr/
E. coli and B. subtilis database
KEGG - Kyoto Encyclopedia of Genes and Genomes
http://www.genome.ad.jp/kegg/
Encyclopedia of genes, genomes, metabolic and regulatory pathways
Regulatory Sites, Promoters, and Operon Predictions in the complete genome sequence of Escherichia coli
http://tula.cifn.unam.mx/~madisonp/E.coli-predictions.html
Text files compiled by Julio Collado-Vides
RegulonDB
http://www.cifn.unam.mx/Computational_Genomics/regulondb/
Julio Collado-Vides database of genes, operons, and regulons
Transport protein links page
http://www.biology.ucsd.edu/~msaier/transport/
Milton Saier (transport classification) and Ian Paulsen (comparison of transport capabilites across bacteria)